Multiple-locus variable-number tandem repeat analysis of Neisseria meningitidis yields groupings similar to those obtained by multilocus sequence typing.

2.50
Hdl Handle:
http://hdl.handle.net/10029/6267
Title:
Multiple-locus variable-number tandem repeat analysis of Neisseria meningitidis yields groupings similar to those obtained by multilocus sequence typing.
Authors:
Schouls, Leo M; Ende, Arie van der; Damen, Marjolein; Pol, Ingrid van de
Abstract:
We identified many variable-number tandem repeat (VNTR) loci in the genomes of Neisseria meningitidis serogroups A, B, and C and utilized a number of these loci to develop a multiple-locus variable-number tandem repeat analysis (MLVA). Eighty-five N. meningitidis serogroup B and C isolates obtained from Dutch patients with invasive meningococcal disease and seven reference strains were analyzed using MLVA and multilocus sequence typing (MLST). MLVA, based on eight VNTR loci with limited variability in the number of repeats, yielded clustering of the strains similar to that obtained by MLST, with congruence between both methods amounting to 69%. The ability to recognize clonal complexes makes MLVA a valuable high-throughput method to serve as a tool complementary to MLST. Four highly variable VNTR loci were used in a second assay to analyze N. meningitidis serogroup C strains collected during an outbreak of meningococcal disease in The Netherlands. Typing based on the latter VNTR loci enabled differentiation of isolates with identical MLST sequence types and grouped epidemiologically related strains.
Citation:
J. Clin. Microbiol. 2006, 44(4):1509-18
Issue Date:
1-Apr-2006
URI:
http://hdl.handle.net/10029/6267
DOI:
10.1128/JCM.44.4.1509-1518.2006
PubMed ID:
16597884
Type:
Article
Language:
en
ISSN:
0095-1137
Appears in Collections:
Infectious Diseases

Full metadata record

DC FieldValue Language
dc.contributor.authorSchouls, Leo M-
dc.contributor.authorEnde, Arie van der-
dc.contributor.authorDamen, Marjolein-
dc.contributor.authorPol, Ingrid van de-
dc.date.accessioned2006-11-29T14:43:37Z-
dc.date.available2006-11-29T14:43:37Z-
dc.date.issued2006-04-01-
dc.identifier.citationJ. Clin. Microbiol. 2006, 44(4):1509-18en
dc.identifier.issn0095-1137-
dc.identifier.pmid16597884-
dc.identifier.doi10.1128/JCM.44.4.1509-1518.2006-
dc.identifier.urihttp://hdl.handle.net/10029/6267-
dc.description.abstractWe identified many variable-number tandem repeat (VNTR) loci in the genomes of Neisseria meningitidis serogroups A, B, and C and utilized a number of these loci to develop a multiple-locus variable-number tandem repeat analysis (MLVA). Eighty-five N. meningitidis serogroup B and C isolates obtained from Dutch patients with invasive meningococcal disease and seven reference strains were analyzed using MLVA and multilocus sequence typing (MLST). MLVA, based on eight VNTR loci with limited variability in the number of repeats, yielded clustering of the strains similar to that obtained by MLST, with congruence between both methods amounting to 69%. The ability to recognize clonal complexes makes MLVA a valuable high-throughput method to serve as a tool complementary to MLST. Four highly variable VNTR loci were used in a second assay to analyze N. meningitidis serogroup C strains collected during an outbreak of meningococcal disease in The Netherlands. Typing based on the latter VNTR loci enabled differentiation of isolates with identical MLST sequence types and grouped epidemiologically related strains.en
dc.format.extent208375 bytes-
dc.format.mimetypeapplication/pdf-
dc.language.isoenen
dc.titleMultiple-locus variable-number tandem repeat analysis of Neisseria meningitidis yields groupings similar to those obtained by multilocus sequence typing.en
dc.typeArticleen
dc.format.digYES-

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